BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038G01LP1|AL430585
(913 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1166 1031 0.0
3x_Contig194 349 6e-96
>3x_Contig1166
Length = 5040
Score = 1031 bits (520), Expect = 0.0
Identities = 520/520 (100%)
Strand = Plus / Plus
Query: 1 gatccttcgcaaagtgctacacaatggacttaccagttctctccagaatgtttcagtgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4521 gatccttcgcaaagtgctacacaatggacttaccagttctctccagaatgtttcagtgat 4580
Query: 61 acacctgtagaatttgctgttgagatctgtgaagccgtaaaggctgcttgggaaccaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4581 acacctgtagaatttgctgttgagatctgtgaagccgtaaaggctgcttgggaaccaact 4640
Query: 121 gaggaaaacccaatcattttcaacctacctgctaccgtcgaagtcgctactccaaacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4641 gaggaaaacccaatcattttcaacctacctgctaccgtcgaagtcgctactccaaacatt 4700
Query: 181 tacgctgatcaaattgaatacttttcaactcacatatctgaacgtgaaaaggtctgtatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4701 tacgctgatcaaattgaatacttttcaactcacatatctgaacgtgaaaaggtctgtatc 4760
Query: 241 tccacacatgcgcacaacgaccgtggctgtggtgttgctgcttctgaactaggtattttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4761 tccacacatgcgcacaacgaccgtggctgtggtgttgctgcttctgaactaggtattttg 4820
Query: 301 gctggtgctgaccgtgtcgaaggttgtttattcggtaatggtgaacgtactggtaacgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4821 gctggtgctgaccgtgtcgaaggttgtttattcggtaatggtgaacgtactggtaacgtt 4880
Query: 361 gacttggttactgtcgcattgaacatgtacactcaaggtgtttctccagaattagactta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4881 gacttggttactgtcgcattgaacatgtacactcaaggtgtttctccagaattagactta 4940
Query: 421 tctgatattaactcagtcattgaagtagtggaaagatgtaacaagattgcagtttcacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4941 tctgatattaactcagtcattgaagtagtggaaagatgtaacaagattgcagtttcacca 5000
Query: 481 agagccccatatggtggtgacttggtcgtttgtgctttca 520
||||||||||||||||||||||||||||||||||||||||
Sbjct: 5001 agagccccatatggtggtgacttggtcgtttgtgctttca 5040
>3x_Contig194
Length = 985
Score = 349 bits (176), Expect = 6e-96
Identities = 176/176 (100%)
Strand = Plus / Plus
Query: 738 gcaaattgaattttccactcaagtgcaagaaaaggctgatgctctaggtaaggaactaaa 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaaattgaattttccactcaagtgcaagaaaaggctgatgctctaggtaaggaactaaa 60
Query: 798 ggcaaacgaaattgtcagcaccttcaagtcgttatacaacctcgatggaagcgcctccaa 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcaaacgaaattgtcagcaccttcaagtcgttatacaacctcgatggaagcgcctccaa 120
Query: 858 catttctttgttagaatacaatgtttctaaagtacagggtgatcagaagagttttg 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catttctttgttagaatacaatgtttctaaagtacagggtgatcagaagagttttg 176
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6144
Number of Sequences: 1807
Number of extensions: 6144
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 2
length of query: 913
length of database: 10,358,551
effective HSP length: 16
effective length of query: 897
effective length of database: 10,329,639
effective search space: 9265686183
effective search space used: 9265686183
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)